Malhotra Lab WWW Server

Department of Biochemistry & Molecular Biology
University of Miami School of Medicine

X-ray Crystallographic & Structural Studies of Gene Expression


Research Areas

People



Contact Info

  • Laboratory: Gautier, Room 105, Ph: 305-243-2890
  • Malhotra Office: Gautier, Room 105A, Ph: 305-243-2826
  • Fax: 305-243-3955
  • Mailing Address: PO Box 016129, Dept. of Biochemistry (R-629), Miami, FL 33101-6129
  • Shipping Address: Malhotra Lab, Department of Biochemistry, Gautier Bldg, Room 105, 1011 NW, 15th Street, Miami, FL 33136-1015

Recent Publications

Local Online Manuals

Equipment & Facilities

Teaching

Other Activities

Funding

  • Startup Funds - Markey Foundation & Department of Biochemistry, University of Miami School of Medicine
  • Initial Investigatorship Award - American Heart Association, FL Affiliate (07/2001-06/2004)
  • New Investigator Award - Florida Biomedical Research Program, Florida Department of Health (06/2001-06/2004)
  • Research Grant R01 - GM69972 - NIGMS, National Institutes of Health (09/2003-08/2008)

Links

Journals
Acta Crystallographica
Acta Cryst D - Blackwell
Acta Cryst F - Blackwell
Biochemistry
Cell
Current Opin. Structural Biology
EMBO Journal
EMBO Reports
Journal of Bacteriology
Journal of Biological Chemistry
Journal of Molecular Biology
Journal of Structural Biology
Nature
Nature Structural & Mol. Biology
Nucl. Acids Research
PLoS Journals
PNAS
Protein Science
RNA
Science
Structure

Calder Library - Online Journal List (UM only)

Encyclopedia of Life Sciences

Databases & Services
PDB
NDB
Pubmed
BLAST
Swiss-Prot
ExPASy Proteomics Tools
PredictProtein - Protein SS Prediction
EMBL Computation Services
NCBI database services
EMBL/EBI tools
RNA World at IMB Jena
Gutell Lab Comparative RNA database
Codon usage analyser

Granting Agencies
NIH - Extramural Funding
NIH - forms & applications
NIH - Center for Scientific Review
NIH - eRA Commons
NSF - Biological Sciences
NSF - Fastlane
ACS Research Programs
American Heart - Reseach Programs
TRAM - grants & forms compilation
Florida Biomedical Research Program
Software
Cn3D
Pymol
Swiss-Pdb Viewer
Rasmol & Chime
Kinemages
VMD - Visual Molecular Dynamics
DINO
Grasp
Molscript
Ribbons
O
O - A to Z
HKL
Shelx
CNS
CCP4
Solve
Phaser
SnB
Sharp
ESPript

Modeller
AutoDock
UCSF Dock

Crystallography on Mac OS X
WIKI - OSX Scientific Computing
Coot
Coot User Manual

X-Ray Sources

NSLS/BNL
NSLS-X12C
CHESS
APS
BioSync - Synchrotron Database

Tutorials & Courses

BNL - Intro to Crystallography
Crystallography at NSLS
Anomalous Scattering - Ethan Merritt
Kevin Cowtan's Book of Fourier
Bernhard Rupp's Crystallography 101
U Guelph Protein/Nucleic acids Course
MBI-UCLA Structural Lab Course
CIMB/MRC-LMB Crystallography Course
MIT - Open CourseWare
NIGMS Publications
Molecules of Life
Structure Analysis Sites
PDBSum - PDB summary & Analysis
CATH - Protein Structure Classification
SCOP - Protein Structure Classification
DALI Server
PDB report
ProCheck
NIH MBI Structure Validation Server
Molprobity
Protein-Protein Interactions
PRODRG2 - Ligand structures

Structural Genomics

Structural Genomics - Target List

NIH Initiative
NY Structural Genomics Consortium
Joint Center for Structural Genomics
Midwest Center for Structural Genomics
Northeast Structural Gen. Consortium
Automation of Structure Determination
Phenix
Stevens Lab - Scripps
HWI Buffalo - HT Screening

Companies/Suppliers

MSC
MarResearch
Hampton Research
Accelrys (MSI)
Fisher Scientific
VWR
Sigma Product Literature

Rockefeller - Protein/DNA Center
Yale HHMI/Keck Analysis Facility
John Hopkins - Sequencing Facility

Other Links

Scripps Florida
Yale Center for Structural Biology
U. Georgia Crystallography Center
Structural Biology at FSU
ORNL-Protein Modeling Resource
LANL - Protein Prediction Center
York University - www resources for Protein Structure
Hazes lab tutorials - U. Alberta


Last Update: April 29th, 2007
Send comments to: malhotra@miami.edu
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